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Systematic stabilization of specific protein-protein interactions

US · IL NIH grant open #nih-5R01GM147696-04

Summary

This proposal focuses on the systematic discovery of selective small-molecule protein-protein interaction (PPI) stabilizers, using the hub protein 14-3-3σ as a model system to develop a toolkit for biological study and potential new drugs.

What they want

The project aims to develop a toolkit of selective, cell-active stabilizers for native 14-3-3/client PPIs. This will involve three main aims: 1) Screening for selective stabilizers of 14-3-3/phosphopeptide clients, using a native C38 residue on the 14-3-3σ isoform. 2) Optimizing 14-3-3/client stabilizers for cell-based activity, converting disulfides to cell-active electrophilic warheads and tuning selectivity for clients like CRAF kinase, estrogen receptor α (ERα), and FOXO1. 3) Designing PROTAC-based degraders of 14-3-3 clients, expanding PROTAC technology by using 14-3-3 as a scaffolding protein to link intrinsically disordered proteins (IDPs) to ubiquitin ligase, starting with ERα and then translating to IDPs like FOXO1.
Deliverables
  • Tool kit of selective, cell-active stabilizers of native 14-3-3/client PPIs
  • Proof-of-concept for the systematic discovery approach
  • Optimized C38-bound fragments (with or without an electrophile) for target-selective PPI stabilization in cells
  • PROTAC-based degraders of 14-3-3 clients
  • Approaches broadly applicable to the 14-3-3 network and extendable to other native and nonnative PPIs
Technical requirements
  • Screening for disulfide-bound fragments that stabilize 14-3-3/phosphopeptide complexes
  • Utilization of native C38 residue on the 14-3-3σ isoform for screening
  • Conversion of disulfides to cell-active electrophilic warheads
  • Tuning the selectivity of 14-3-3σ/client stabilizers
  • Design of PROTACs (bifunctional molecules that induce proximity between a ubiquitin ligase and a target)
  • Use of 14-3-3 as a scaffolding protein to link intrinsically disordered proteins (IDPs) to ubiquitin ligase
Systematic stabilization of specific prote…
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