Summary
This project investigates the cellular and circuit mechanisms by which patterned sensory stimulation (PSS) affects brain activity and non-neuronal cell populations, focusing on the mouse cortex as a model system.
What they want
The project will systematically investigate mechanisms of PSS by dissecting how cell types and circuit properties in the brain mediate the entrainment of neural activity and modifications of neuronal and non-neuronal cell populations. This involves systematic modeling efforts using highly detailed, bio-realistic models of mouse cortical circuits to simulate PSS effects at the level of a single cortical area (primary visual cortex) and the whole mouse cortex. Models of coupling from neuron activity to non-neuronal cells (e.g., microglia, vasculature) will also be developed. These modeling efforts will be combined with electrophysiology recordings in awake mice, accompanied by chronic and acute perturbations using chemogenetics and optogenetics. Modeling predictions regarding the roles of excitatory and inhibitory cell types in different cortical layers will be tested experimentally, and models will be refined. The project will also characterize transcriptomic and epigenetic responses to PSS in different cell types, correlating these with circuit effects.
Deliverables
- A rich description of molecular, cell type, and circuit mechanisms mediating PSS effects.
- Highly biologically realistic, ready-to-use computational models applicable for studies of PSS and other phenomena, to be freely shared with the community.
Technical requirements
- Bio-realistic models of mouse cortical circuits
- Electrophysiology recordings in awake mice
- Chronic and acute perturbations using chemogenetics
- Chronic and acute perturbations using optogenetics
- Characterization of transcriptomic responses to PSS
- Characterization of epigenetic responses to PSS